Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866628:139866665:[+] chr6:126299711:126299746:[+] nonBSJ supported 3UTR

circRNA 5':CAGCAUCUCCAGGGCUUCCAGCAUCU-GCUCGUCUU-CCA 3'


            |||| |||::: |||: ||| :| ||


target  3':AUCGU---GGUUUUUU-GGUUAAAGAUUGUUUUAUAUGGA 5'

 -13.70 1 RIC-seq
chrX:139866646:139866697:[+] chr6:126299700:126299746:[+] nonBSJ supported 3UTR

circRNA 5':CAGCAUCUGCUCGUCUUCCAACAUCUCCACGUCUUCCAGCAUCUCUGUGUCU 3'


            ||||:| |||| ||| ||: :|:||


target  3':AUCGUGGUUUUUU----GGUUAAAGAU-UGUUUUAUAUGGAUACUUUAUAGU 5'

 -14.20 19 RIC-seq