5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866296:139866319:[+] | chr12:6979624:6979647:[+] | nonBSJ supported | 3UTR |
circRNA 5':UUGUCUUCCCUCAAAUCCAUA-GCU 3' || | || ||| | |||| || target 3':UACUGU-GGUAGUCUUCGUAUACGU 5' |
-8.70 | 1 | RIC-seq |
| chrX:139866331:139866346:[+] | chr12:6979654:6979667:[+] | nonBSJ supported | 3UTR |
circRNA 5':CAGGUCUUCCAGGAAA 3' |||:| |||||| target 3':CUCCGGU--GUCCUUC 5' |
-14.40 | 1 | RIC-seq |
| chrX:139866331:139866363:[+] | chr12:6979635:6979667:[+] | nonBSJ supported | 3UTR |
circRNA 5':CAGGUCUUCCAGGAAAUCC---GUGUCUUCCAGCAA 3' |||:| |||||| :|| | ||| || target 3':CUCCGGU--GUCCUUCCUCGUCUACUGU-GGUAGUC 5' |
-17.50 | 10 | RIC-seq |
| chrX:139865766:139865811:[+] | chr12:6979217:6979252:[+] | nonBSJ supported | CDS |
circRNA 5':UCUUCCAGAAAGAAAUCCA-GGU-CUUCCAGUCAAUCAGUGU-CUUCCA 3' |||| || |||| || |||| || |||| ||||| target 3':UGAAG-----UCGGUAGGAGCCUCGAAG-------AG-CACAUGAAGGA 5' |
-24.00 | 9 | RIC-seq |
| chrX:139866674:139866701:[+] | chr12:6979217:6979245:[+] | nonBSJ supported | CDS |
circRNA 5':ACGUCUUCC-AGCAUCUCUGUGU-CUUCCA 3' |:||:|| ||| |||| |||| ||||| target 3':GGUAGGAGCCUCGAAGAG-CACAUGAAGGA 5' |
-29.90 | 8 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chrX:139866296:139866319:[+] | circRNA | - | chrX:139866318-139866319 | C>T | BTCA-JP | ICGC |