Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865675:139865693:[+] chr12:100491208:100491220:[-] nonBSJ supported CDS

circRNA 5':CUUCCAGAAAAAUCUGUGU 3'


            ||| ||| ||||


target  3':AAAGUUCU------ACACU 5'

 -4.70 13 RIC-seq
chrX:139865675:139865697:[+] chr12:100491208:100491225:[-] nonBSJ supported CDS

circRNA 5':CUUCCAGAAAAAUCUGUGU-CUUC 3'


            ||| ||| |||| |||


target  3':AAAGUUCU------ACACUUGAAA 5'

 -5.70 1 RIC-seq
chrX:139865831:139865852:[+] chr12:100502199:100502224:[-] nonBSJ supported CDS

circRNA 5':CAGUCAGUCA-GUGUCU---UCCAGA 3'


            ||: ||:|| || ||||:


target  3':AUCGUUCGGUACAACCGUUUAGGUUG 5'

 -12.10 5 RIC-seq