Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865579:139865638:[+]	chr12:113410580:113410639:[+]	nonBSJ supported	3UTR	circRNA 5':AGAUCUUCCAGGAAAAUCCACGUCUUC------CAGGAAAUCCAUGUCUUCCAAUAAUUUCAAGGU 3' \| \|\|\|\|\| \|\| \|:\|\|\|\| \|\|:\|\|\|\|\| \|\| :\|:\|\| :\|\|\|\|\| target 3':ACCAGAAGUGAAAG--AGA--CGGAAGACCGACGUUCUUUACGUU-GGGAGAAAAUGGUGGUUCC 5'	-27.30	20	RIC-seq
chrX:139865579:139865649:[+]	chr12:113410581:113410639:[+]	nonBSJ supported	3UTR	circRNA 5':AGAUCUUCCAGGAAAAUCCACGUCUUC------CAGGAAAUCCAUGUCUUCCAAUAAUUUCAAGGUCUUCCAUCAAA 3' \| \|\|\|\|\| \|\| \|:\|\|\|\| \|\|:\|\|\|\|\| \|\| :\|:\|\| \|\|\|:\|\|\| target 3':ACCAGAAGUGAAAG--AGA--CGGAAGACCGACGUUCUUUACGUU-GGGAGAAAAU-------------GGUGGUUC 5'	-25.90	1	RIC-seq
chrX:139865581:139865638:[+]	chr12:113410580:113410637:[+]	nonBSJ supported	3UTR	circRNA 5':AUCUUCCAGGAAAAUCCACGUCUUC------CAGGAAAUCCAUGUCUUCCAAUAAUUUCAAGGU 3' \|\|\|\|\| \|\| \|:\|\|\|\| \|\|:\|\|\|\|\| \|\| :\|:\|\| :\|\|\|\|\| target 3':CAGAAGUGAAAG--AGA--CGGAAGACCGACGUUCUUUACGUU-GGGAGAAAAUGGUGGUUCC 5'	-27.10	1	RIC-seq