Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866616:139866651:[+] chr12:121137777:121137808:[+] nonBSJ supported 3UTR

circRNA 5':CUCCAGGUC-UUCCAGCAUCUCCAGGGCUUCCAGCAU 3'


            ||||||:| |||||| :|||| |||


target  3':UAGGUCCGGAAAGGUCCUC-----UCCGAUCUCCGUC 5'

 -30.50 22 RIC-seq
chrX:139866617:139866651:[+] chr12:121137777:121137806:[+] nonBSJ supported 3UTR

circRNA 5':UCCAGGUC-UUCCAGCAUCUCCAGGGCUUCCAGCAU 3'


            |||||:| |||||| :|||| |||


target  3': GGUCCGGAAAGGUCCUC-----UCCGAUCUCCGUC 5'

 -27.90 1 RIC-seq