Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865783:139865805:[+]	chr12:109040521:109040560:[-]	nonBSJ supported	Intron	circRNA 5': CAGGUCUUCC--------AGUCA--------AUCAGUGU 3' \|\|:\|\|\|\|\|\|\| \|\|\|\|\| \|:\|\|\| \|\| target 3':AGUUCAGAAGGACAACAUGUCAGUAGUUUUACUGGUC-CAA 5'	-21.60	1	RIC-seq
chrX:139865783:139865851:[+]	chr12:109040521:109040585:[-]	nonBSJ supported	Intron	circRNA 5': CAGGUCUUCCAGUCAAUCAGUGUCUUCCAGAAAGAAAUCCAGGU-----CUUCCAGUC-AGUCAGUGUCUUCCAG 3' \|\|:\|\|\|\|\|\|\| \|\| \|\|\|\| \|\|:\|\| \|\| \|\|\|\|\|\| \|\| \|\|: \|\|:\|\|\|:: \|\|\| target 3':AGUUCAGAAGGACAACAUGUCAGUA---GUUUUACU---GGUCCAAACACGAC-GUUUCCUCGGUCGU----GGUA 5'	-39.60	1	RIC-seq
chrX:139866019:139866052:[+]	chr12:109040505:109040532:[-]	nonBSJ supported	Intron	circRNA 5':AAAUCCACGUCUUCCCAACAAUCCAAGUCUUCCG 3' \|\|\|\|\|\|\|\|\| \|\|\|\|\|\|\|\|\|\| target 3':CUUAGGUGCACUAAAAA------GUUCAGAAGGA 5'	-25.50	2	RIC-seq