5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866059:139866111:[+] | chr11:10823878:10823929:[-] | nonBSJ supported | CDS |
circRNA 5':UUGGGUCUUCCUGAAAAUCUACG-UCUUCCAAAAAAGCCAUG------UCUUCCAGAAAA 3' |||||| ||| |||:| || ||| | |||| :|:|||||||| target 3': ACCCAG--GGA----UAGGUAAAAGUAGGACCCACC-GUACUUGCCAGGGAGGUCUUUC 5' |
-32.90 | 2 | RIC-seq |
| chrX:139866225:139866280:[+] | chr11:10823848:10823893:[-] | nonBSJ supported | CDS |
circRNA 5': UGUCUUC------CAGCAAGUCCACGUCUUCCAACAAAGCCAUGUCUUCCAGACUAUCCAUG 3' ||||: |||||||||| |||| || |||: |||||||| target 3':AACAGGUUUGUAUAGUCGUUCAGG------AGGU----UCACC-CAGG------GAUAGGUAA 5' |
-33.50 | 1 | RIC-seq |
| chrX:139866226:139866280:[+] | chr11:10823849:10823893:[-] | nonBSJ supported | CDS |
circRNA 5': GUCUUC------CAGCAAGUCCACGUCUUCCAACAAAGCCAUGUCUUCCAGACUAUCCAUG 3' |||: |||||||||| |||| || |||: |||||||| target 3':ACAGGUUUGUAUAGUCGUUCAGG------AGGU----UCACC-CAGG------GAUAGGUAA 5' |
-32.80 | 1 | RIC-seq |