5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866315:139866357:[+] | chr11:111779405:111779457:[-] | nonBSJ supported | 3UTR |
circRNA 5':UAGCUUCCGAAAAA-UC-CAGGUCUUCCA-----------GGAAAUCCGUGUCUUC 3' |||||| | || ||:| ||| || |||||: |||| target 3':UUCGAAGUCGUGAUCAGUGUUCUGAAAGUAAGUGACCACCCCUUUGAA---AGAAC 5' |
-18.80 | 23 | RIC-seq |
| chrX:139866351:139866378:[+] | chr11:111779406:111779434:[-] | nonBSJ supported | 3UTR |
circRNA 5':UGUCUUCCAGCAAAUC-CACGU--CUUCCAA 3' | ||| ||||| |||: ||| || target 3':UC-GAA-GUCGUGAUCAGUGUUCUGAAAGUA 5' |
-12.00 | 1 | RIC-seq |
| chrX:139865341:139865363:[+] | chr11:111781066:111781086:[-] | nonBSJ supported | CDS |
circRNA 5':GUUUCCGAUGGCACCUGUGUCAA 3' |||||: |||||| :||| target 3':AAAAGGUA--CGUGGAGUUAGUG 5' |
-18.90 | 1 | RIC-seq |
| chrX:139865390:139865412:[+] | chr11:111781074:111781098:[-] | nonBSJ supported | CDS |
circRNA 5':AGCGACUUCAA----GUCUUCCAAUAA 3' || ||:|||| :|||:||||:| target 3': CG-UGGAGUUAGUGUAGAGGGUUGUG 5' |
-21.20 | 30 | RIC-seq |
| chrX:139865972:139866007:[+] | chr11:111782329:111782365:[-] | nonBSJ supported | CDS |
circRNA 5': GUCUUCCAGAAAAUCCAUGUCUUCCAGUAAC-CUCCC 3' ||| |:|| ||| ||: ||| | |||| target 3':GCAGCCC-UUUUCUAGUCUGAGGUUGUCCACGAGAGGC 5' |
-14.40 | 12 | RIC-seq |
| chrX:139865977:139866030:[+] | chr11:111782317:111782377:[-] | nonBSJ supported | CDS |
circRNA 5':CCAGAAAAUCC-AUGUCUUC-------CAGUAACCUCC--CAG----UCUUCC-AGAAAAUCCACGUCU 3' ||| |:||| ||| |||| ||| |||:| |||| ||| target 3': GUCCCUUCAUCUGCAGCCCUUUUCUAGUCU---GAGGUUGUCCACGAGAGGCUUCUUGAC----CAGU 5' |
-14.00 | 3 | RIC-seq |
| chrX:139865986:139866006:[+] | chr11:111781062:111781081:[-] | nonBSJ supported | CDS |
circRNA 5':CCAUGUCUUCCAGUAACCUCC 3' ||||| ||||| ||||| target 3': GUACAAAAGGUACGUGGAGU 5' |
-19.90 | 25 | RIC-seq |
| chrX:139865987:139866030:[+] | chr11:111782327:111782377:[-] | nonBSJ supported | CDS |
circRNA 5':CAUGUCUUC-------CAGUAACCUCC--CAG----UCUUCC-AGAAAAUCCACGUCU 3' |:||| ||| |||| ||| |||:| |||| ||| target 3':CUGCAGCCCUUUUCUAGUCU---GAGGUUGUCCACGAGAGGCUUCUUGAC----CAGU 5' |
-13.80 | 10 | RIC-seq |
| chrX:139866110:139866135:[+] | chr11:111782419:111782447:[-] | nonBSJ supported | CDS |
circRNA 5':AAUCCACAUCUUCCA-AUGGCC---UCCAG 3' ||||| ||||| |||| target 3':CUAGGUCCCCACCACCUACCGCUACAGGU 5' |
-13.30 | 8 | RIC-seq |
| chrX:139866125:139866137:[+] | chr11:111782413:111782427:[-] | nonBSJ supported | CDS |
circRNA 5':AUGGCC--UCCAGGU 3' |||| |||||| target 3':CGCCGCCUAGGUCCC 5' |
-15.30 | 9 | RIC-seq |
| chrX:139866624:139866663:[+] | chr11:111779653:111779694:[-] | nonBSJ supported | CDS |
circRNA 5':CUUCCAGCAU--CUCCAGGGCUUCCAGCAUC-UGCUCGUCUUC 3' |||| |||| || |:| || ||:||:| target 3':AAAGGACACCUUGAGGGACCUCUACUU-UGGUACAAGUAGGAU 5' |
-19.70 | 22 | RIC-seq |
| chrX:139866655:139866690:[+] | chr11:111781060:111781101:[-] | nonBSJ supported | CDS |
circRNA 5':CUCGUC--UUCCAA-CAUCUC---CACGUCUUCCAGCAUCUC 3' ||:| ||||| ||:||| |||:|||:|||:||:|| target 3':AAGUACAAAAGGUACGUGGAGUUAGUGUAGAGGGUUGUGGAA 5' |
-40.10 | 1 | RIC-seq |
| chrX:139866661:139866690:[+] | chr11:111781069:111781101:[-] | nonBSJ supported | CDS |
circRNA 5':UUCCAA-CAUCUC---CACGUCUUCCAGCAUCUC 3' |||| ||:||| |||:|||:|||:||:|| target 3': AGGUACGUGGAGUUAGUGUAGAGGGUUGUGGAA 5' |
-36.90 | 1 | RIC-seq |
| chrX:139866668:139866709:[+] | chr11:111781057:111781101:[-] | nonBSJ supported | CDS |
circRNA 5':AUCUCCACGUCUUCCA-GCAUCUCUGU---GUCUUCCAGCAUCUUC 3' ||| || || ||||| |||:||| :| :|||:|||:||:||| target 3':GAGAAGUACAAAAGGUACGUGGAGUUAGUGUAGAGGGUUGUGGAA 5' |
-41.50 | 10 | RIC-seq |
| chrX:139866700:139866725:[+] | chr11:111781070:111781101:[-] | nonBSJ supported | CDS |
circRNA 5': CA-GCAUCU---UCAUGUCUUCCAACAACU 3' || |||:|| |||::|||:|||||| || target 3':GGUACGUGGAGUUAGUGUAGAGGGUUGUGGAA 5' |
-29.50 | 12 | RIC-seq |
| chrX:139866703:139866725:[+] | chr11:111781074:111781101:[-] | nonBSJ supported | CDS |
circRNA 5': CAUCU---UCAUGUCUUCCAACAACU 3' ||:|| |||::|||:|||||| || target 3':CGUGGAGUUAGUGUAGAGGGUUGUGGAA 5' |
-24.80 | 1 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr11:111779653:111779694:[-] | target | 16953 | chr11:111779658-111779659 | T>C | Myofibrillar_myopathy_2 | ClinVar |
| chr11:111779653:111779694:[-] | target | 38963 | chr11:111779672-111779673 | GA>G | Cardiovascular_phenotype|Myofibrillar_myopathy_2|Cataract_16_multiple_types|Fatal_infantile_hypertonic_myofibrillar_myopathy|Dilated_cardiomyopathy_1II|not_provided | ClinVar |
| chr11:111779653:111779694:[-] | target | 265829 | chr11:111779690-111779691 | T>C | Cardiomyopathy,_familial_restrictive,_1|Dilated_cardiomyopathy_1II | ClinVar |
| chr11:111779653:111779694:[-] | target | 41930 | chr11:111779691-111779692 | C>G | Myofibrillar_myopathy_2 | ClinVar |
| chr11:111781057:111781101:[-] | target | 1074961 | chr11:111781080-111781081 | C>A | Cardiovascular_phenotype|Dilated_cardiomyopathy_1II | ClinVar |
| chr11:111781060:111781101:[-] | target | 1074961 | chr11:111781080-111781081 | C>A | Cardiovascular_phenotype|Dilated_cardiomyopathy_1II | ClinVar |
| chr11:111781062:111781081:[-] | target | 1074961 | chr11:111781080-111781081 | C>A | Cardiovascular_phenotype|Dilated_cardiomyopathy_1II | ClinVar |
| chr11:111781066:111781086:[-] | target | 1074961 | chr11:111781080-111781081 | C>A | Cardiovascular_phenotype|Dilated_cardiomyopathy_1II | ClinVar |
| chr11:111781069:111781101:[-] | target | 1074961 | chr11:111781080-111781081 | C>A | Cardiovascular_phenotype|Dilated_cardiomyopathy_1II | ClinVar |
| chr11:111781070:111781101:[-] | target | 1074961 | chr11:111781080-111781081 | C>A | Cardiovascular_phenotype|Dilated_cardiomyopathy_1II | ClinVar |
| chr11:111781074:111781098:[-] | target | 1074961 | chr11:111781080-111781081 | C>A | Cardiovascular_phenotype|Dilated_cardiomyopathy_1II | ClinVar |
| chr11:111781074:111781101:[-] | target | 1074961 | chr11:111781080-111781081 | C>A | Cardiovascular_phenotype|Dilated_cardiomyopathy_1II | ClinVar |
| chr11:111782317:111782377:[-] | target | 2630615 | chr11:111782348-111782349 | T>TC | CRYAB-related_disorder | ClinVar |
| chr11:111782317:111782377:[-] | target | 1322163 | chr11:111782373-111782374 | G>A | Dilated_cardiomyopathy_1II | ClinVar |
| chr11:111782327:111782377:[-] | target | 2630615 | chr11:111782348-111782349 | T>TC | CRYAB-related_disorder | ClinVar |
| chr11:111782327:111782377:[-] | target | 1322163 | chr11:111782373-111782374 | G>A | Dilated_cardiomyopathy_1II | ClinVar |
| chr11:111782329:111782365:[-] | target | 2630615 | chr11:111782348-111782349 | T>TC | CRYAB-related_disorder | ClinVar |
| chr11:111782419:111782447:[-] | target | 44236 | chr11:111782446-111782447 | C>T | Dilated_cardiomyopathy_1II|Cataract_16_multiple_types|Cardiomyopathy|not_specified|not_provided | ClinVar |
| chrX:139866315:139866357:[+] | circRNA | - | chrX:139866318-139866319 | C>T | BTCA-JP | ICGC |