Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866316:139866357:[+]	chr4:170641890:170641926:[+]	nonBSJ supported	3UTR	circRNA 5':AGCUUCCGAAAAAUCCAGGUCUU--CCAGGAAAUCCGUGUCUUC 3' \|\|\|\|\|\| \|\| \|\|: \|\|\| \|\| \| \|:\|\|\| target 3':GCGAAGGA-----AGCUCU-GAAAUGGACAAACUACU-CGGAAA 5'	-14.30	8	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866316:139866357:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC