Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866382:139866437:[+] chr4:166243376:166243415:[+] nonBSJ supported 3UTR

circRNA 5':AGC-CAUGUCUUCCAUCAAAUUAAUGUCUUCC-AGCCUACUU-GUGUCUUCCAACAAAG 3'


            || ||| ||: ||||||| ||| |||| ||||


target  3':ACGAGUA-----------------ACGUCUUUUUCGGAUGUGCCAC-GAAGAUGGUUU 5'

 -21.60 18 RIC-seq
chrX:139866428:139866440:[+] chr4:166243387:166243398:[+] nonBSJ supported 3UTR

circRNA 5':UCCAACAAAGGUA 3'


            || ||| |||


target  3':CGGAUGUG-CCAC 5'

 -6.70 1 RIC-seq