Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865721:139865737:[+] chr17:48755357:48755373:[+] nonBSJ supported Intron

circRNA 5':AAUCUAGUUCUUCCAGA 3'


            |:|: | | |||||


target  3':CUGGGACUUGU-GGUCUC 5'

 -7.40 13 RIC-seq
chrX:139865721:139865738:[+] chr17:48755357:48755373:[+] nonBSJ supported Intron

circRNA 5':AAUCUAGUUCUUCCAGAA 3'


            |:|: | | |||||


target  3':CUGGGACUUGU-GGUCUC 5'

 -8.30 1 RIC-seq
chrX:139865790:139865828:[+] chr17:48755371:48755407:[+] nonBSJ supported Intron

circRNA 5':UCCAGUCAAUCAGUGUCUUCCA-GAAAGAAAU--CCAGGUCU 3'


            ||||| || ||| ||||| | ||| |


target  3':CGGUCAAAAG---AC-GAAUCCCCUUUCCUCCCUGUUCCUG 5'

 -11.80 3 RIC-seq
chrX:139865790:139865829:[+] chr17:48755370:48755406:[+] nonBSJ supported Intron

circRNA 5':UCCAGUCAAUCAGUGUCUUCCA-GAAAGAAAU--CCAGGUCUU 3'


            ||||| || ||| ||||| | ||| |:


target  3': GGUCAAAAG---AC-GAAUCCCCUUUCCUCCCUGUUCCUGG 5'

 -11.90 1 RIC-seq
chrX:139865790:139865829:[+] chr17:48755370:48755407:[+] nonBSJ supported Intron

circRNA 5':UCCAGUCAAUCAGUGUCUUCCA-GAAAGAAAU--CCAGGUCUU 3'


            ||||| || ||| ||||| | ||| |:


target  3':CGGUCAAAAG---AC-GAAUCCCCUUUCCUCCCUGUUCCUGG 5'

 -12.30 13 RIC-seq
chrX:139865791:139865829:[+] chr17:48755370:48755405:[+] nonBSJ supported Intron

circRNA 5':CCAGUCAAUCAGUGUCUUCCA-GAAAGAAAU--CCAGGUCUU 3'


            |||| || ||| ||||| | ||| |:


target  3': GUCAAAAG---AC-GAAUCCCCUUUCCUCCCUGUUCCUGG 5'

 -8.80 1 RIC-seq