Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866767:139866815:[+]	chr17:48445387:48445432:[-]	nonBSJ supported	3UTR	circRNA 5': ACGUCUCCAGUGUGCUGAUCUUCUGACAUUCAGGUCUUCCAGUGUCUGC 3' \|\| \|\|\| \|\|:\| : \|\|\|\|:\|\|\| \|\|:: \|\|: \|\|\|\|\|\| \|\|\|\| target 3':CUGAAGAC--CAUAGUGGUAGAGGACAGUGGACCCG--AGGUCAGAGACA 5'	-38.20	1	RIC-seq
chrX:139866774:139866809:[+]	chr17:48445238:48445296:[-]	nonBSJ supported	3UTR	circRNA 5':CAGUGUGC-----UGAUCUUCUGA--CAU------------------UCAGGUCUUCCAGU 3' \|\|::\|\|\| \|\|\|: \|\|\| \|\|: \|\|\|\|\|\|\|\|:\|\|\|: target 3':AUCGUACGCAAGUACUGC--GACCGAGUGAAAUAAAAACCGGGGUCCAGUCCAGAGGGUUU 5'	-30.20	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866767:139866815:[+]	circRNA	-	chrX:139866793-139866794	C>T	LICA-CN	ICGC
chrX:139866774:139866809:[+]	circRNA	-	chrX:139866793-139866794	C>T	LICA-CN	ICGC