Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866285:139866323:[+]	chr17:40277074:40277111:[-]	nonBSJ supported	3UTR	circRNA 5':CCAGAAAA-------UCCUUGUCUUCCCUCAAAUCCAUAGCUUCCG 3' \|\|\|\|\|\|\| \|\|\| \|\|\| \|\|\|\|\| \|\|\|: \|::\|\| target 3':UGUCUUUUUCAACCAAGG--CAG--GGGAG----GGUGAGGGGGGG 5'	-28.50	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866285:139866323:[+]	circRNA	-	chrX:139866318-139866319	C>T	BTCA-JP	ICGC