Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865861:139865889:[+] chr17:4849039:4849068:[-] nonBSJ supported 3UTR

circRNA 5':CGUCU-UCCA-CCAAAUCCAGGUCUUCCAGU 3'


            |||| |||| ||| :|| ||:| :||||:


target  3':ACAGACAGGUAGGUC-GGGACCGG-GGGUCGG 5'

 -30.00 1 RIC-seq
chrX:139865861:139865891:[+] chr17:4849039:4849069:[-] nonBSJ supported 3UTR

circRNA 5':CGUCU-UCCA-CCAAAUCCAGGUCUUCCAGUCA 3'


            |||| |||| ||| :|| ||:| :||||:|


target  3':ACAGACAGGUAGGUC-GGGACCGG-GGGUCGGG 5'

 -33.00 13 RIC-seq