Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865788:139865813:[+] chr17:46056235:46056259:[+] nonBSJ supported CDS

circRNA 5':CUUCCA-GUCAAUCAGUGUCUUCCAGA 3'


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target  3':UAAGGCCCAG--AGUCACAUAAGUUCG 5'

 -18.50 2 RIC-seq
chrX:139865819:139865852:[+] chr17:46056235:46056258:[+] nonBSJ supported CDS

circRNA 5':AUCCAGGUCUUCCAGUCAGUCAGUGUCUUCCAGA 3'


            ||| |||| ||||||| ||| ||


target  3':AAGGCCCAG----------AGUCACAUAAGUUCG 5'

 -20.60 4 RIC-seq