Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865858:139865891:[+] chr17:38320288:38320324:[+] nonBSJ supported CDS

circRNA 5':CUACGUCU-UCCACCAAA----UCCAGGUCUUCCAGUCA 3'


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target  3':CAUGAUCUUAGGUGGCCUCGAAGGGUCCAG--GGUCAGA 5'

 -32.90 19 RIC-seq
chrX:139865865:139865891:[+] chr17:38320288:38320316:[+] nonBSJ supported CDS

circRNA 5':UUCCACCAAA----UCCAGGUCUUCCAGUCA 3'


            |||||| :||||||| ||||||


target  3':UAGGUGGCCUCGAAGGGUCCAG--GGUCAGA 5'

 -31.60 1 RIC-seq