Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865385:139865409:[+]	chr17:37357510:37357534:[+]	nonBSJ supported	CDS	circRNA 5': CUU-CCAGCGACUUCAAGUCUU-CCAA 3' \|\| \|\|\|\| \|\|\|\| \|\|\|\| \|\|\| target 3':AGAUUGGUCUG-GAAGA--AGAACGGUG 5'	-15.10	4	RIC-seq
chrX:139866472:139866534:[+]	chr17:37359285:37359335:[+]	nonBSJ supported	CDS	circRNA 5':AGGUAUGUCUUCCAACAAAGGUACGUCUUCCAGAAAAUCCACGUCUUCCAACCAAGCCAUGUC 3' \|\|\| :\|\|\|\|\| :\|:\| \|:\| \|\|\|\|\|\|\| \|:\| :\|\|\| \|\| \|\|\|\|\|\| target 3':GCCA--UAGAAGAC-----UCGU-CGGCCGCG-UUUUAGGAGUAAGAGGA--GUA-GGUACAC 5'	-30.60	13	RIC-seq
chrX:139866472:139866534:[+]	chr17:37359285:37359359:[+]	nonBSJ supported	CDS	circRNA 5':AGGUAU---GUCUUCCAACAAA---GGUACGUCUUC----CAG-------AAAAUCCACGUCUUCCAACCAAGCCAUGUC 3' \|\|: :\|\|\|\|\| \|\|\| :\|\|\|\|\| \|\|\| \|\|\|\|\|\|\| \|:\| :\|\|\| \|\| \|\|\|\|\|\| target 3':ACCGCUAGCUAGAAGAAUCUAAGUGCCA--UAGAAGACUCGUCGGCCGCGUUUUAGGAGUAAGAGGA--GUA-GGUACAC 5'	-33.10	17	RIC-seq