Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866200:139866228:[+] chr10:105354818:105354840:[-] nonBSJ supported 3UTR

circRNA 5':AAAUCCGGGU-CUUCCAGGAAAUCCGUGUC 3'


            ||:||||| || ||| |:|:|


target  3':CUUGGGCCCUCGA----CCUAC--GUAUA 5'

 -15.30 2 RIC-seq
chrX:139866205:139866236:[+] chr10:105354801:105354838:[-] nonBSJ supported 3UTR

circRNA 5':CGGGUCUU-CCAG--GA-AAUCCGUGU-CUUCCAGCA 3'


            |||: |||| || ||:||| | || |||


target  3':ACCCGUUUUGGUCGACUCUUGGGCCCUCGACCUACGUA 5'

 -19.70 2 RIC-seq