Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866516:139866549:[+] chr10:73820088:73820142:[-] nonBSJ supported 3UTR

circRNA 5': CUUCCA-------------------AC-CAAGCCAUGU-CUUCCAGAAAAUCCAC 3'


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target  3':AGAAGGAUUUUGUAUAAAUGUUCCUGUGUGUUUGC-ACGUGUCGGUCUUCUGGGUC 5'

 -22.90 21 RIC-seq
chrX:139866521:139866549:[+] chr10:73820113:73820142:[-] nonBSJ supported 3UTR

circRNA 5':AAC-CAAGCCAUGU-CUUCCAGAAAAUCCAC 3'


            || |||:| ||: | |||||| |:|||


target  3':GUGUGUUUGC-ACGUGUCGGUCUUCUGGGUC 5'

 -20.70 4 RIC-seq