Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865432:139865448:[+] chr9:74970384:74970398:[-] nonBSJ supported 3UTR

circRNA 5':AUCCUGAGCUUCCAGAA 3'


            |||| |||||||:|


target  3':AAGGA--CGAAGGUUUC 5'

 -17.30 2 RIC-seq
chrX:139865444:139865481:[+] chr9:74970353:74970388:[-] nonBSJ supported 3UTR

circRNA 5':CAGAAAAUCCACAUCUUCCAGACAAUCCAUGUCUUCCG 3'


            |||| || |||:|| ||| ||||||


target  3':UUCUUCCAGAC-UAGGAGAAAUACUC-GUAAAGAAGGA 5'

 -16.80 2 RIC-seq