Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866683:139866704:[+]	chr9:82189816:82189835:[+]	nonBSJ supported	5UTR	circRNA 5':AGCAUCUCUGUGUCUUCCAGCA 3' \|\|\|\|\|\|\| \|\|\|\|\|\|\| :\| target 3':ACGUAGAG--ACAGAAGAGUGA 5'	-23.10	17	RIC-seq
chrX:139866767:139866792:[+]	chr9:82189814:82189834:[+]	nonBSJ supported	5UTR	circRNA 5':ACGUCUCCAGUGUGCUGAUCUUCUGA 3' \|:\|\|\|\| \|\|\| \|\| \|\| \|\|\| target 3':CGUAGAG---ACA-GAAGAGU-GACC 5'	-14.10	1	RIC-seq
chrX:139866767:139866793:[+]	chr9:82189816:82189834:[+]	nonBSJ supported	5UTR	circRNA 5':ACGUCUCCAGUGUGCUGAUCUUCUGAC 3' \|:\|\|\|\| \|\| \|\|\|\|\|\| \|\| target 3':CGUAGAG--------AC-AGAAGAGUGA 5'	-15.00	2	RIC-seq
chrX:139866767:139866794:[+]	chr9:82189816:82189834:[+]	nonBSJ supported	5UTR	circRNA 5':ACGUCUCCAGUGUGCUGAUCUUCUGACA 3' \|:\|\|\|\| \|\| \|\|\|\|\|\| \|\| target 3':CGUAGAG--------AC-AGAAGAGUGA 5'	-16.30	18	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866767:139866793:[+]	circRNA	-	chrX:139866793-139866794	C>T	LICA-CN	ICGC
chrX:139866767:139866794:[+]	circRNA	-	chrX:139866793-139866794	C>T	LICA-CN	ICGC