5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866329:139866374:[+] | chr7:121636575:121636622:[+] | nonBSJ supported | CDS |
circRNA 5':UCCAGGUCUUCCAGGAAAUCCGUGUC-----UUCCAGCAAAUCCACGUCUU 3' |||:||||| :| ||| |||| ||| || |||: target 3':UGGUUCAGAACUAUCGGUAG--ACAGUUUUUAAGUACGAACCAAACCAGG 5' |
-22.40 | 3 | RIC-seq |
| chrX:139866775:139866790:[+] | chr7:121608081:121608095:[+] | nonBSJ supported | CDS |
circRNA 5':AGUGUGCUGAUCUUCU 3' ||||: ||||||| target 3':ACACAUU-CUAGAAGU 5' |
-15.20 | 1 | RIC-seq |
| chrX:139865698:139865729:[+] | chr7:121651743:121651780:[+] | nonBSJ supported | Intron |
circRNA 5':CACCAAA-UCCAA-GUCUUC----CAGUAAAUCUAGUU 3' |||||| |||| ||||: |||:| |||| target 3':AUGGUUUAAGGUCGCAGAGACUUCGUCGUACUCAUCAC 5' |
-21.40 | 2 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr7:121651743:121651780:[+] | target | rs150698072 | chr7:121651751-121651752 | A>G | Epithelial ovarian cancer | GWAS Catalog |
| chr7:121636575:121636622:[+] | target | - | chr7:121636578-121636579 | C>A | BTCA-JP | ICGC |