5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866260:139866286:[+] | chr7:121650414:121650446:[+] | nonBSJ supported | CDS |
circRNA 5':AUGUCUU--CCAGACUAUC-CA----UGUCUUCC 3' |||||: |||| || || :|:|||| target 3':GACAGAGAUGGUCCUA-AGUGUUAUCGCGGAAGA 5' |
-18.30 | 2 | RIC-seq |
| chrX:139865841:139865891:[+] | chr7:121532193:121532254:[+] | nonBSJ supported | Intron |
circRNA 5':GUGUCUU-C-CAGAAAAAUCUACGUCUUC---CAC--CAAAUCCAGGUCUUC------CAGUCA 3' |||||| | ||||||| :||| ||| ||||: | |||| |||:| target 3': ACAGAAUGUGUCUUUUGUUCAAUAGAUUGUUGUGAAGUUUGUUAAC-GAAGUUCCUUGUCGGG 5' |
-26.10 | 2 | RIC-seq |
| chrX:139866719:139866782:[+] | chr7:121597727:121597789:[+] | nonBSJ supported | Intron |
circRNA 5':AACAACUACC-CAGUCUUCCAUCAACUGGCUCAAUAUCCAU-GUCUUCCAACGUCUCC-AGUGUGCU 3' ||| || |||| || ||| :|| ||| ||:|||| | ||||| target 3':AUGUACUCGGAGUCAAU-GGAAUA-GACAUUUUCUUUCUUAUUAG-AGG-UGUAGAGUCUGACACGU 5' |
-31.80 | 1 | RIC-seq |
| chrX:139866728:139866782:[+] | chr7:121597727:121597808:[+] | nonBSJ supported | Intron |
circRNA 5':CCAGUCUU----CCAUCAACU-------GGCUCAAUAUCCAUGUCU------------------UCCAACGUCUCC-AGUGUGCU 3' ||||||: |||:| ||| | |||| || |:||| ||| ||:|||| | ||||| target 3': GUCAGAGUCGUGGUGG-UGAAUGUACUCGGAGUCAAUGGAAUAGACAUUUUCUUUCUUAUUAGAGG-UGUAGAGUCUGACACGU 5' |
-43.70 | 1 | RIC-seq |