Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865828:139865873:[+] chr7:121623794:121623839:[+] nonBSJ supported CDS

circRNA 5':UUCCAGUCAGUCAGUGUCUUC-CAGAAAAAUCUACGUCUUCCA-CCAA 3'


            ||||||||: | |||||| ||| ||| |||


target  3':UAGGUCAGUU-GACACAGACACGUCCCUCCUCUA-CAGUUACUCGGUA 5'

 -27.00 10 RIC-seq
chrX:139865829:139865873:[+] chr7:121623794:121623837:[+] nonBSJ supported CDS

circRNA 5':UCCAGUCAGUCAGUGUCUUC-CAGAAAAAUCUACGUCUUCCA-CCAA 3'


            |||||||: | |||||| ||| ||| |||


target  3': GGUCAGUU-GACACAGACACGUCCCUCCUCUA-CAGUUACUCGGUA 5'

 -24.40 1 RIC-seq
chrX:139866219:139866262:[+] chr7:121623793:121623839:[+] nonBSJ supported CDS

circRNA 5':AAUCC--------GUGUCUUC-CAGCAAGUCCACGUCUUCCAACAAAGCCAUG 3'


            |||| |||||| ||| || ||| ||||||


target  3': UAGGUCAGUUGACACAGACACGUCCCUCCUCUACAGUUAC-----UCGGUAA 5'

 -19.20 10 RIC-seq