Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866661:139866703:[+]	chr19:42879695:42879738:[+]	nonBSJ supported	CDS	circRNA 5':UUCCAACAUCUCCACGUCUUCC-------AGCAUCUCUGUGUCUUCCAGC 3' \|\|\| \|\|\|\|\|\| \|\|\|\|: \|\|\| \|:\| :\|\|\|\| target 3': AGGAC---GAGGUGGCUCUACUCCGCCAUCGUGACGAC-CGGCGGGUC 5'	-26.70	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr19:42879695:42879738:[+]	target	-	chr19:42879701-42879702	G>A	BTCA-JP	ICGC