Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866617:139866650:[+] chr19:34857248:34857285:[+] nonBSJ supported CDS

circRNA 5':UCCAGGUCU--UCCAGCAUCUCC----AGGGCUUCCAGCA 3'


            ||||| :||| |||| || |||


target  3':UGGUCCUAUACGGGUACCAACCACAACUCCC--AGUUCGA 5'

 -18.20 29 RIC-seq
chrX:139866644:139866660:[+] chr19:34857269:34857285:[+] nonBSJ supported CDS

circRNA 5':UCCAGCAUCUGCUCGUC 3'


            |||| || |||:|:|


target  3':UGGUCCUAUACGGGUAC 5'

 -14.10 1 RIC-seq