Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866645:139866663:[+] chr19:3053855:3053873:[-] nonBSJ supported CDS

circRNA 5':CCAGCAUC-UGCUCG-UCUUC 3'


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target  3': GUGGUAGCACGGGCAAGAA 5'

 -18.50 23 RIC-seq
chrX:139866648:139866663:[+] chr19:3053857:3053873:[-] nonBSJ supported CDS

circRNA 5':GCAUC-UGCUCG-UCUUC 3'


            |||| |||:|| ||||


target  3':GGUAGCACGGGCAAGAA 5'

 -16.10 2 RIC-seq