Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865414:139865481:[+] chr8:24811032:24811078:[-] nonBSJ supported Exon

circRNA 5':CUCAAGGUCUUCCAGAUAAUCCUGAGCUUCCAGAAAAUCCACAUCUUCCAGACAAUCCAUGUCUUCCG 3'


            || ||:||| |||| ||||| ||:| |||| || |||


target  3':CAGGAAGAGGAGG------AGGAGCCGAAG-------------AGGAAGUCUCCCCCCCG-AGUAGG 5'

 -29.10 1 RIC-seq
chrX:139865414:139865481:[+] chr8:24811032:24811079:[-] nonBSJ supported Exon

circRNA 5':CUCAAGGUCUUCCAGAUAAUCCUGAGCUUCCAGAAAAUCCACAUCUUCCAGACAAUCCAUGUCUUCCG 3'


            || ||:||| |||| ||||| ||:| |||| || |||


target  3':CAGGAAGAGGAGG------AGGAGCCGAAG-------------AGGAAGUCUCCCCCCCG-AGUAGGA 5'

 -28.80 25 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr8:24811032:24811078:[-] target 1984363 chr8:24811065-24811066 G>. Charcot-Marie-Tooth_disease_type_2E ClinVar
chr8:24811032:24811079:[-] target 1984363 chr8:24811065-24811066 G>. Charcot-Marie-Tooth_disease_type_2E ClinVar