Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866519:139866536:[+] chr8:66534520:66534540:[-] nonBSJ supported CDS

circRNA 5':CCAAC--CAAGCCAUG-UCUU 3'


            |||| || :|| | |||:


target  3':AGUUGUAGUAUGGGUCAAGAG 5'

 -10.00 1 RIC-seq
chrX:139866524:139866548:[+] chr8:66534515:66534541:[-] nonBSJ supported CDS

circRNA 5':CAAGC-C-AUGUCU--UCCAGAAAAUCCA 3'


            |||| | |::|| :|||| |||


target  3':AUUCGAGUUGUAGUAUGGGUCAAG-AGG 5'

 -16.30 2 RIC-seq
chrX:139866524:139866548:[+] chr8:66534515:66534542:[-] nonBSJ supported CDS

circRNA 5':CAAGC-C-AUGUCU--UCCAGAAAAUCCA 3'


            |||| | |::|| :|||| |||


target  3':AUUCGAGUUGUAGUAUGGGUCAAG-AGGA 5'

 -16.10 36 RIC-seq