Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866405:139866418:[+] chr8:57876269:57876284:[-] nonBSJ supported 3UTR

circRNA 5':UGUCUU--CCAG-CCUA 3'


            ||||: |||: |||


target  3': CAGAGGUGGUUAGGAA 5'

 -11.20 1 RIC-seq
chrX:139866405:139866430:[+] chr8:57876269:57876293:[-] nonBSJ supported 3UTR

circRNA 5':UGUCUU--CCAG-CCUACUUGUGUCUUCC 3'


            ||||: |||: ||| ||| ||||


target  3': CAGAGGUGGUUAGGA--AACUUCGAAG 5'

 -14.70 12 RIC-seq
chrX:139866405:139866431:[+] chr8:57876269:57876294:[-] nonBSJ supported 3UTR

circRNA 5':UGUCUU--CCAG-CCUACUUGUGUCUUCCA 3'


            ||||: |||: ||| ||| |||||


target  3': CAGAGGUGGUUAGGA--AACUUCGAAGG 5'

 -18.90 3 RIC-seq
chrX:139866405:139866432:[+] chr8:57876269:57876295:[-] nonBSJ supported 3UTR

circRNA 5':UGUCUU--CCAG-CCUACUUGUGUCUUCCAA 3'


            ||||: |||: ||| ||| ||||||


target  3': CAGAGGUGGUUAGGA--AACUUCGAAGGU 5'

 -19.60 10 RIC-seq