Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866215:139866244:[+] chr8:90785014:90785034:[+] nonBSJ supported CDS

circRNA 5':AGGAAAUCCGUGUCUUCCAGCAAGUCCACG 3'


            ||| |||:|: :|||||


target  3':ACCUAAAA-CACGGG--------UAGGUGA 5'

 -16.90 1 RIC-seq
chrX:139866295:139866316:[+] chr8:90785014:90785029:[+] nonBSJ supported CDS

circRNA 5':CUUGUCUUCCCUCAAAUCCAUA 3'


            |||| ||| |||||:


target  3':AAACAC--GGG----UAGGUGA 5'

 -11.90 3 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr8:90785014:90785034:[+] target - chr8:90785032-90785033 C>T RECA-EU ICGC