Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865878:139865887:[+] chr15:44876017:44876027:[-] nonBSJ supported CDS

circRNA 5':AGGUCU-UCCA 3'


            || || |||


target  3':ACCUGAGAGGA 5'

 -7.70 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr15:44876017:44876027:[-] target 2780577 chr15:44876023-44876024 C>CT Hereditary_spastic_paraplegia_11 ClinVar