Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865726:139865771:[+] chr15:51988111:51988159:[+] nonBSJ supported CDS

circRNA 5':AGUUCUUCCAGAAAA-AUCUAGAUCUUC-C--AGUCAAUCAGUGUCUUCC 3'


            ||| ||||| |:| |||||| | ||||||||||||| |||


target  3': UAACAAGGUAUAAAGUGGUAGUAGAAGUGUUUCAGUUAGUCACAAAAGU 5'

 -35.20 19 RIC-seq
chrX:139865730:139865771:[+] chr15:51988111:51988156:[+] nonBSJ supported CDS

circRNA 5':CUUCCAGAAAA-AUCUAGAUCUUC-C--AGUCAAUCAGUGUCUUCC 3'


            ||||| |:| |||||| | ||||||||||||| |||


target  3':CAAGGUAUAAAGUGGUAGUAGAAGUGUUUCAGUUAGUCACAAAAGU 5'

 -35.20 1 RIC-seq