5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865784:139865852:[+] | chr16:69117420:69117493:[+] | nonBSJ supported | CDS |
circRNA 5':AGGUCUUCCA--GUCAAUCA---GUGU--CUU--CCAGAAAGAAAUCCAGGUCUUCCAGUCAGUCA--GUGUCUUC--CAGA 3' | ||||| |:|||: :|| ||| ||| ||| ||: ||||| || ||| |||| ||| target 3': CGAGAAGAUCCCGGUUGACCCGUACCUCGAACCGGUGCAG---UAGC-CCG--AGGUCUGUGUGAUGCAC-GAAGUCGUCC 5' |
-34.30 | 1 | RIC-seq |
| chrX:139865801:139865853:[+] | chr16:69117440:69117504:[+] | nonBSJ supported | CDS |
circRNA 5':AGUGUCUUCCAGAAAGAAAUCCAGGUCUUCCA-----------------------GUCA-GUCAGUGUCUUCCAGAA 3' ||||| |||||| ||||| |:|| |||| :| :|||||| target 3':CUACAG------------UAGGUCGAGAAGAUCCCGGUUGACCCGUACCUCGAACCGGUGCAGUAGCCCGAGGUCUG 5' |
-33.80 | 1 | RIC-seq |