Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866620:139866640:[+] chr16:48574224:48574244:[-] nonBSJ supported 3UTR

circRNA 5':AGGUCUUCCA--GCAUCUCCAGG 3'


            ||||:||| :|||| ||||


target  3':CUCAGGAGGGAGUGUAG-GGUC 5'

 -24.60 1 RIC-seq
chrX:139866657:139866686:[+] chr16:48574225:48574245:[-] nonBSJ supported 3UTR

circRNA 5':CGUCUUCCAACAUCUCCACGUCUUCCAGCA 3'


            |||:||| || |||:|| |||||


target  3':UCAGGAGG-----GA-GUGUAG--GGUCG 5'

 -26.30 10 RIC-seq