Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866140:139866160:[+] chr13:30784477:30784498:[-] nonBSJ supported CDS

circRNA 5':UCCAGACUAUCCAU--GUCUUCC 3'


            ||||| || || :|||||


target  3': GGUCUUAUCGGGAGUUAGAAGA 5'

 -15.10 1 RIC-seq
chrX:139866158:139866178:[+] chr13:30784477:30784498:[-] nonBSJ supported CDS

circRNA 5':UCCAGAAAA-UCCUU-GUCUUCC 3'


            |||||| :|||: :|||||


target  3': GGUCUUAUCGGGAGUUAGAAGA 5'

 -17.10 19 RIC-seq