Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865635:139865682:[+]	chrX:48434943:48434983:[+]	nonBSJ supported	CDS	circRNA 5':AGGUCUUCCAUCAAAUACAGAUCUUCCAG--CUA-AUCCAUGUCUUCCAGA 3' \|\|\|\|\|: \|\| \| \|\|\|\| \|:\| \|\|\|\|\|\|::\|:\|\|\|\|\| target 3':AUCAGAGAC----------CUUGCAGGUAUAGGUAUAGGUAUGGGAGGUCC 5'	-30.60	1	RIC-seq
chrX:139865903:139865920:[+]	chrX:48435856:48435873:[+]	nonBSJ supported	CDS	circRNA 5':CCGGAAAAAA-UCCAGGUC 3' \|:\|\|\|\| \|\|\| \|\| target 3': GUCUUUAAUAAGGAACAC 5'	-7.60	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:48434943:48434983:[+]	target	-	chrX:48434952-48434953	T>G	LAML-KR	ICGC