Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865794:139865813:[+] chr20:10628618:10628642:[-] nonBSJ supported CDS

circRNA 5': GUCAAU---CAGU-GUCUUCCAGA 3'


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target  3':CCAGCACGCCGUCACCAGAAAGUCC 5'

 -13.90 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr20:10628618:10628642:[-] target 1354095 chr20:10628640-10628641 AG>A Alagille_syndrome_due_to_a_JAG1_point_mutation ClinVar