Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866205:139866242:[+]	chr20:35545210:35545234:[-]	nonBSJ supported	CDS	circRNA 5':CGGGUCUUCCAGGAAAUCCGUGUCUUCCAGCAAGUCCA 3' \|\|:\| \|\|\|\|:\|\| :\|\| \|\| \|\|\|\|\| target 3':ACCUA--AGGUUCUAC---UAC-------CG-UCAGGG 5'	-19.40	9	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr20:35545210:35545234:[-]	target	2500708	chr20:35545219-35545220	A>G	Aicardi-Goutieres_syndrome_5	ClinVar