Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865587:139865610:[+]	chr20:4764163:4764187:[-]	nonBSJ supported	3UTR	circRNA 5':CAGG-AAAAUCCACGUCUUC-CAGGA 3' \|\|\| \| \|\|\|\|\|\|\| \|\|\|\|\| \|\|\|\| target 3':CUCCGUCUUAGGUG-AGAAGUGUCCA 5'	-24.30	1	RIC-seq
chrX:139865587:139865620:[+]	chr20:4764163:4764196:[-]	nonBSJ supported	3UTR	circRNA 5':CAGG-AAAAUCCACGUCUUC-CAGGAAAUCCAUGUC 3' \|\|\| \| \|\|\|\|\|\|\| \|\|\|\|\| \|\|\|\| \|\|\|\|::\| target 3':CUCCGUCUUAGGUG-AGAAGUGUCCAA-AGGUGUAU 5'	-30.20	23	RIC-seq
chrX:139865475:139865515:[+]	chr20:4778655:4778682:[-]	nonBSJ supported	CDS	circRNA 5':UCUUCCGGACAAUCCAUGUCUUCCAAGAAGCUCCAAG-UCUU 3' \|\|:\|\|\|\| \|\|:\| \| \|\|\|\| \|\|: \|\|\| target 3':GGAGGGCC--------ACGG------CCUCGACAUUUAAGAC 5'	-15.10	21	RIC-seq