Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865741:139865768:[+] chr20:62124563:62124590:[-] nonBSJ supported CDS

circRNA 5':AUCUAGAUCUUCCAGUCAAU-CAGUGUCU 3'


            ||:|| |:|||||: || :|:|


target  3':CAGGUCCCGGAGGUCGUCCCUGU-GCGGC 5'

 -21.10 1 RIC-seq
chrX:139865770:139865794:[+] chr20:62124553:62124578:[-] nonBSJ supported CDS

circRNA 5':CCAGAAAGAAAUCCAGGUCUUCCAG 3'


            ||| |||||| |:|||||


target  3':CGUCCUACCACAGGUCCCGGAGGUCG 5'

 -22.70 2 RIC-seq
chrX:139865770:139865794:[+] chr20:62124554:62124578:[-] nonBSJ supported CDS

circRNA 5':CCAGAAAGAAAUCCAGGUCUUCCAG 3'


            ||| |||||| |:|||||


target  3': GUCCUACCACAGGUCCCGGAGGUCG 5'

 -22.30 44 RIC-seq