Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866221:139866235:[+]	chr20:45866149:45866164:[-]	nonBSJ supported	Intron	circRNA 5':UCCGU-GUCUUCCAGC 3' \|\| \|:\|\|:\|\|\|: target 3':CGGAACCGGAGGGUUU 5'	-13.30	1	RIC-seq
chrX:139866347:139866361:[+]	chr20:45866149:45866164:[-]	nonBSJ supported	Intron	circRNA 5':UCCGU-GUCUUCCAGC 3' \|\| \|:\|\|:\|\|\|: target 3':CGGAACCGGAGGGUUU 5'	-13.30	1	RIC-seq
chrX:139866620:139866662:[+]	chr20:45867207:45867248:[-]	nonBSJ supported	Intron	circRNA 5':AGGUCUUCCAGCAUCUCCA-GGGCUUCCAGCAUCUGCUCGUCUU 3' \|\| \|:\| :\|:\|\|\| :\|\| \|\|\| target 3':ACCUUCCAUUUGCCCUAUUGUCUGAAAAUACAUUUUGAA-AGA 5'	-8.00	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr20:45866149:45866164:[-]	target	-	chr20:45866158-45866159	T>C	PRAD-CA	ICGC