Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865365:139865393:[+] chr14:39649957:39649984:[+] nonBSJ supported CDS

circRNA 5':GUCUUCCAACAACUCCGGGUC-UUC-CAGCG 3'


            |||||| |||| || ||| | ||


target  3':AAGAAGGAG---GAGGACAAGAAAGAGACGU 5'

 -18.80 2 RIC-seq
chrX:139865419:139865445:[+] chr14:39649785:39649828:[+] nonBSJ supported CDS

circRNA 5':GGUCUUCCA-----------GAUAAUCCUGA-GCU-----UCCA 3'


            |:|||| | ||||| ||| |||


target  3':GCGGAAGACAAGAAGUAAUGCGUGGUGGACUACGAGAAAAAGGA 5'

 -16.80 2 RIC-seq