Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865477:139865521:[+]	chr14:91929122:91929172:[-]	nonBSJ supported	CDS	circRNA 5':UUC-CGGAC--AAUCC-----AUGUCUUCCAAGAAGCUCCAAGUCUUCCAGUA 3' \|\| \|:\| \|\|\|\|\| \|\|\|\|\|\| \|\| :\|\|\|\|\|\|\|\|\| target 3':UAGAGUCAAAAUUAGGAAAUUUACAGACAUGUAUUAGAUG--UAGAAGGUCAC 5'	-25.50	2	RIC-seq
chrX:139865467:139865492:[+]	chr14:91942301:91942328:[-]	nonBSJ supported	Intron	circRNA 5':AAUCCAUGUCUUCCGGACAAUC--CAUG 3' \|\|\|\|\|\|\|:\|:\| \|:\|\|\|\|\| \|\|\| target 3':GUAGGUACGGGACGUCUGUUUUUUGUAA 5'	-25.70	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr14:91929122:91929172:[-]	target	-	chr14:91929170-91929171	G>T	PACA-CA	ICGC