Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865558:139865579:[+] chr22:41996621:41996646:[-] nonBSJ supported 3UTR

circRNA 5':UACUGGUCUUC----CACCAAAUCCA 3'


            ||:||||:: ||||||||||


target  3':UUGGCCAGGGUACAUGUGGUUUAGGA 5'

 -26.80 27 RIC-seq
chrX:139865559:139865579:[+] chr22:41996621:41996646:[-] nonBSJ supported 3UTR

circRNA 5': ACUGGUCUUC----CACCAAAUCCA 3'


            ||:||||:: ||||||||||


target  3':UUGGCCAGGGUACAUGUGGUUUAGGA 5'

 -26.40 1 RIC-seq