5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866205:139866218:[+] | chr22:39781110:39781123:[+] | nonBSJ supported | 3UTR |
circRNA 5':CGGGUCUUCCAGGA 3' ||||||:||||| target 3':CCCCAGAGGGUCCC 5' |
-25.40 | 1 | RIC-seq |
| chrX:139866205:139866231:[+] | chr22:39781090:39781123:[+] | nonBSJ supported | 3UTR |
circRNA 5':CGGGUCUUCCAGGAAAUCC-------GUGUCUUC 3' ||||||:||||| ||||||: target 3':CCCCAGAGGGUCCCGAUUGUCCGUCCCACAGAGU 5' |
-30.00 | 1 | RIC-seq |
| chrX:139866205:139866235:[+] | chr22:39781088:39781123:[+] | nonBSJ supported | 3UTR |
circRNA 5':CGGGUCUUCCAGGAAAUCC-------GUGUCUUCCAGC 3' ||||||:||||| |||||| ||| target 3':CCCCAGAGGGUCCCGAUUGUCCGUCCCACAGA--GUCA 5' |
-30.70 | 29 | RIC-seq |
| chrX:139866231:139866252:[+] | chr22:39780970:39780988:[+] | nonBSJ supported | 3UTR |
circRNA 5':CCAGCAAGUCCACGUCUUCCAA 3' ||:| |: ||: |::||| target 3':AGUUGA-CGC-UGU-GGGGGUC 5' |
-11.40 | 1 | RIC-seq |