Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866545:139866561:[+] chr22:33245485:33245499:[+] nonBSJ supported CDS

circRNA 5':UCCA-CGUCUUCCAGAAA 3'


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target  3':UGGUCGCAC--GG-CUUC 5'

 -7.70 1 RIC-seq
chrX:139866548:139866571:[+] chr22:33245488:33245519:[+] nonBSJ supported CDS

circRNA 5':ACGUCUU--------------CCAGAAAAUAUAUGUCU 3'


            |:||| |||| ||:|


target  3':AGUAGACGAACUACCACAUCUGGUCGC------ACGGC 5'

 -7.20 15 RIC-seq