5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866199:139866245:[+] | chr22:38881755:38881804:[-] | nonBSJ supported | 3UTR |
circRNA 5':AAAAUC---CGG-GUCUUCCAGGAAAUCCGUGUCUUCCAGCAAGUCCACGU 3' |||:| |:| | ||| |: |||| |::| :|||:| |||| target 3':CUUUGGACCGUCACUUAAGAUUGAUUAGACGUACUUUUCUGUUUA-GUGCU 5' |
-17.50 | 2 | RIC-seq |
| chrX:139866337:139866375:[+] | chr22:38884352:38884393:[-] | nonBSJ supported | 5UTR |
circRNA 5':UUCC--AGGAAAUCCGUGUCU-----UCCAGCAAAUCCACGUCUUC 3' ||| ||| ||||| :||: ||||: ||| |:||: target 3':UAGGAUUCCCUUAGGG-UAGGUUUGUAGGUUUG--AGGA-CGGAGA 5' |
-25.30 | 1 | RIC-seq |
| chrX:139866340:139866393:[+] | chr22:38884324:38884393:[-] | nonBSJ supported | 5UTR |
circRNA 5':CAGGAAAUCCGUGUCU---------------UCC--AGCAAAUCCACGUCU-----UCCAACAAAGCCAUGUCUUC 3' ||||||| :||| ||| || ||||| |:||: ||||| || ||:||: target 3': UCCUUUAUCC-UAGAAAUAACCGACAUCUUAGGAUUCCCUUAGG-GUAGGUUUGUAGGUUUGA--GG-ACGGAGA 5' |
-31.00 | 1 | RIC-seq |
| chrX:139865535:139865556:[+] | chr22:38887053:38887070:[-] | nonBSJ supported | Intron |
circRNA 5':AGCAAAUCCAGUCUUCCAGCAA 3' || ||| |||:|||:|| target 3':GCGG--AGG--AGAGGGUUGUC 5' |
-18.50 | 2 | RIC-seq |
| chrX:139865558:139865565:[+] | chr22:38887677:38887684:[-] | nonBSJ supported | Intron |
circRNA 5':UACUGGUC 3' |||:|: target 3':UUGAUCGA 5' |
-6.00 | 1 | RIC-seq |
| chrX:139865558:139865570:[+] | chr22:38887677:38887689:[-] | nonBSJ supported | Intron |
circRNA 5':UACUGGUCUUCCA 3' |||:| ||| || target 3':UUGAUC-GAAUGUU 5' |
-6.50 | 3 | RIC-seq |