Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865378:139865402:[+] chr22:22049967:22049992:[+] nonBSJ supported Intron

circRNA 5':UCCGGGUCUUCC-AGCGACUUCAAGU 3'


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target  3':CGGUCCAGGACCUUUGUCCCGGUUCC 5'

 -18.50 1 RIC-seq
chrX:139865379:139865394:[+] chr22:22050007:22050035:[+] nonBSJ supported Intron

circRNA 5':CCGGGUCU-------------UCCAGCGA 3'


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target  3':CGUCCGGAACACGAACUUCCAGGGUCGUC 5'

 -17.60 1 RIC-seq