Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866618:139866657:[+]	chr19:8551226:8551271:[+]	nonBSJ supported	CDS	circRNA 5':CCAGGUCUUCCA-GCAUCUCCAG------GGCUUCCAGCAUCUGCUC 3' \|\|\|\|:\|\|\|\|\| \|\| \|:\|\|\|\| \|\|\|:\|\|\|\|\|\| \|\|::\|: target 3':CGUCCGGAAGGACCGGUGGGGUCCUCGUACCGGAGGUCG-AGGUGGU 5'	-53.50	2	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr19:8551226:8551271:[+]	target	-	chr19:8551250-8551251	T>C	BTCA-JP	ICGC